An example data set for an IMPACT analysis coming from a clinical collaborator

This set was created from a sample of 20 patients from publicly available prostate cancer data from cBioPortal (study_id = "gbc_mskcc_2022").

Usage

clin_collab_df

Format

A data frame with copy number alterations (CNA) retrieved from cBioPortal.

cbioportal_id

character with IMPACT sample ID

ctype

character cancer type

primary_mets

character with sample type