Functions for working with the high performance computing cluster

  • hpcc_get_arg() retrieve character argument passed from terminal, e.g. qsubR bootstrap_analysis.R "mets"

  • hpcc_get_seq_number() retrieve sequence integer when a sequence of jobs were submitted from the terminal, e.g qsubR -a 1-50%10 bootstrap_analysis.R

hpcc_get_arg()

hpcc_get_seq_number()